[Abstract] [NPS@ help] [Original server]
Program: blastp : protein sequence versus protein sequence database blastx : nucleotide sequence (6 frames) versus protein sequence database
Database : BCL-2 database protein sequences (BCL2DB) Bacterial tyrosine kinase database protein sequences (BYKdb) Hepatitis B virus database protein sequences (HBVdb) Hepatitis C virus database polyprotein sequences (euHCVdb) Hepatitis C virus database protein sequences (euHCVdb) UniProtKB/Swiss-Prot protein sequences (Swiss-Prot) UniProt Knowledgebase protein sequences (UniProtKB/Swiss-Prot + UniProtKB/TrEMBL) AlphaFold2 database protein sequences (AF2DB) ESM Metagenomic Atlas 30% high confidence protein sequences (ESM Atlas) Protein Data Bank (PDB) ENT coordinate sequences Protein Data Bank (PDB) ENT coordinate sequences - maximum 95% identity Protein Data Bank (PDB) ENT coordinate sequences - maximum 25% identity Protein Data Bank SEQRES sequences Protein sequences with 3D coordinates (PDB SEQRES 95% + AlphaFold2 DB 50% + ESM Atlas 30% high confidence) databases
Sequence name (optional) : Paste a protein/nucleotide sequence below : help
BLAST parameters: Filter query sequence (-F) : TrueFalse (DUST with BLASTN, SEG with others) Expectation value (-e, real) : 1e-061e-031e-021e-011.010.0100.0 Number of results to show (-v, int == -b, int) : 50010002000500010000 Matrix (-M) : BLOSUM45BLOSUM50BLOSUM62BLOSUM80PAM30PAM70PAM250