This site is a fork of the original PRABI NPS@ server

[HOME] [DESCRIPTION] [HELP] [NEWS] [CONTACT] [Geno3D]

July 30, 2024: NPS@ updated (see NEWS).

When you see in NPS@ the sentence "Paste your sequence below", you must paste a sequence as indicated below.

SEQUENCES :

• Protein (Hepatitis B virus core protein):

  MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAIL
  CWGELMTLATWVGNNLEDPASRDLVVNYVNTNVGLKIRQLLWFHISCLTFGRETVLEYLV
  SFGVWIRTPPAYRPPNAPILSTLPETTVVRRRDRGRSPRRRTPSPRRRRSPSPRRRRSQS
  RESQC
  

• Nucleotide (Hepatitis B virus core) :

  atggacattgacccttataaagaatttggagctactgtggagttactctcgtttttgcct
  tctgacttctttccttccgtcagagatctcctagacaccgcctcagctctgtatcgagaa
  gccttagagtctcctgagcattgctcacctcaccatactgcactcaggcaagccattctc
  tgctggggggaattgatgactctagctacctgggtgggtaataatttggaagatccagca
  tctagggatcttgtagtaaattatgttaatactaacgtgggtttaaagatcaggcaacta
  ttgtggtttcatatatcttgccttacttttggaagagagactgtacttgaatatttggtc
  tctttcggagtgtggattcgcactcctccagcctatagaccaccaaatgcccctatctta
  tcaacacttccggaaactactgttgttagacgacgggaccgaggcaggtcccctagaaga
  agaactccctcgcctcgcagacgcagatctccatcgccgcgtcgcagaagatctcaatct
  cgggaatctcaatgttag
  

ALLOWED CHARACTERS :

• Protein : ABCDEFGHIKLMNPQRSTUVWXYZ
  Warning: B,U,Z are substituted in X because some softwares don't understand them.
• Nucleotide : ABCDGHKMNRSTUVWY

CODES :

• Protein :

     A   alanine               B   aspartate or asparagine
     C   cystine               D   aspartate
     E   glutamate             F   phenylalanine
     G   glycine               H   histidine
     I   isoleucine            K   lysine
     L   leucine               M   methionine
     N   asparagine            P   proline
     Q   glutamine             R   arginine
     S   serine                T   threonine	
     U   selenocysteine        V   valine
     W   tryptophan            X   any
     Y   tyrosine              Z   glutamate or glutamine
  

• Nucleotide :

     A   adenosine             B   G T C
     C   cytidine              D   G A T
     G   guanine               H   A C T
     K   G T (keto)            M   A C (amino)
     N   A G C T (any)         R   G A (purine)
     S   G C (strong)          T   thymidine
     U   uridine               V   G C A
     W   A T (weak)            Y   T C (pyrimidine)
  

SEQUENCE IDENTIFIERS :
The sequence identifiers must have at least six characters.
The allowed characters are : ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz_0123456789

© 1998-2024

Legal notice