NPS@ : CLUSTALW multiple alignment

NPS@ at CRCL is a partial mirror of the original NPS@ server

CLUSTALW

[Abstract] [NPS@ help] [Original server]

Paste a protein sequence databank in Pearson/Fasta format below : help

All sequence names must be different !

Output width :

CLUSTALW Parameters
Output format :
Output oder :

Pairwise alignment type :

Fast pairwise alignment parameters Slow pairwise alignment parameters

K-tuple (word) size :
Number of top diagonals :
Window size :
Gap penalty :
Scoring method : Protein weight matrix :
Gap openig penalty :
Gap extension penalty :

Multiple Alignment Parameters :
Weight matrix :
Gap opening penalty :
Gap extension penalty :
Residue-specific gap penalties OFF :
Hydrophilic gaps OFF :
Hydrophilic residues :
Percent of identity for delay :
Gap separation distance :
No end gap separation penalty :

Last modification time : Thu Jan 14 21:48:31 2016. Current time : Fri Jan 24 10:13:27 2020. User : public@18.206.12.79.

Fast pairwise alignment parameters	Slow pairwise alignment parameters
K-tuple (word) size : Number of top diagonals : Window size : Gap penalty : Scoring method :	Protein weight matrix : Gap openig penalty : Gap extension penalty :